https://fgeier.r-universe.devRecent package updates in fgeierR-universehttps://github.com/fgeier.pnghttps://fgeier.r-universe.devTue, 28 Apr 2026 12:37:31 GMTflorian.geier@unibas.ch (Florian Geier)The packages provides position specific weight matrices (PWMs) for 303 human serine/threonine and 93 tyrosine kinases originally published in Johnson et al. 2023 (doi:10.1038/s41586-022-05575-3) and Yaron-Barir et al. 2024 (doi:10.1038/s41586-024-07407-y). The package includes basic functionality to score user provided phosphosites. It also includes pre-computed PWM scores ("background scores") for a large collection of curated human phosphosites which can be used to rank PWM scores relative to the background scores ("percentile rank").https://github.com/r-universe/bioc/actions/runs/38045778810Tue, 28 Apr 2026 12:37:31 GMTJohnsonKinaseData1.9.0successhttps://bioc.r-universe.devhttps://github.com/bioc/JohnsonKinaseDataJohnsonKinaseData.RmdJohnsonKinaseData.htmlUsing JohnsonKinaseData to predict kinase-substrate relationships2024-03-11 16:47:462024-09-24 19:37:40